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GUIDELINES FOR CATALOGUE PRODUCTION
Data input & authentication for
genomic libraries |

|
Data Sets
Data entry and validation
Library Name
|
Field |
Library Name |
|
Description |
library Identifier e.g. WI/MIT, RCPI1 |
|
Input Process |
Ensure Every Library has Unique identifier,
New Library as given by depositor. |
|
Required for |
MDS |
Organism
|
Field |
Organism |
|
Description |
The Organism represented in the Library |
|
Input Process |
CABRI agreed list (Note: may have multiple species):
| Organism |
|
Synonym |
| Mouse |
|
Murine, Mus Musculus |
| Human |
|
Homo Sapiens |
| Rat |
|
|
| Fugu |
|
|
| Drosophila |
|
|
| Dog |
|
Canine |
|
Required for |
MDS |
|
Type of Library
|
Field |
Type |
|
Description |
Type of Library |
|
Input Process |
CABRI agreed list:
PAC
BAC
YAC
PI
cDNA |
|
Required for |
MDS |
Vector
|
Field |
Vector |
|
Description |
Vector name , more specific than type as will be specific about vector e.g. pCYPAC, Lawrist4 |
|
Input Process |
Supplied by depositor, may have multiple vectors per library |
|
Required for |
MDS |
Insert Size
|
Field |
Insert Size |
|
Description |
Average size of inserts in vector in Kb |
|
Input Process |
Numeric entry |
|
Required for |
MDS |
Library coverage
|
Field |
Library coverage |
|
Description |
Degree of coverage |
|
Input Process |
Numeric entry |
|
Required for |
MDS |
MTA required
|
Field |
MTA required |
|
Description |
Is a material Transfer Agreement required |
|
Input Process |
"Yes" or "No" |
|
Required for |
MDS |
|
Guidelines prepared for CABRI by BCCM, CBS, CERDIC, DSMZ, ECACC, HGMP, INRC, MSDN
Page layout by CERDIC
Copyright CABRI, 1998 |
© The CABRI Consortium 1999-2003.
This work cannot be reproduced in whole or in part without the express
written permission of the CABRI consortium.
Site maintained by the CABRI webmaster.
Last revised on January 15th, 2002.
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