Echinocatena
arthrinioides

Echinopodospora
jamaicensis - sacchari - terrestris

Echinosporangium
transversale

Effetia
craspedoconidica

Eladia
saccula

Elaphomyces
muricatus

Eleutherascus
lectardii - peruvianus

Ellisomyces
anomalus

Ellurema
indica

Elsinoë
annonae - jasmini - phaseoli - veneta - ziziphi

Embellisia
abundans - allii - chlamydospora - didymospora - hyacinthi - indefessa - leptinellae - phragmospora - planifunda - proteae - telluster - tumida

Emericella
desertorum - falconensis - foeniculicola - heterothallica - navahoensis - nidulans - purpurea - quadrilineata - rugulosa - similis - subulata - undulata - variecolor - violacea

Emericellopsis
maritima - minima - mirabilis - sphaerospora - synnematicola - terricola

Emilmuelleria
spirotricha

Entomophthora
blunckii - gigantea

Entyloma
globigenum

Ephelis
oryzae

Epicoccum
nigrum

Epidermophyton
stockdaleae

Eremascus
albus - fertilis

Eremodothis
angulata

Eremomyces
bilateralis

Erynia
nouryi

Eupenicillium
cryptum

Eurotium
amstelodami - chevalieri - costiforme - echinulatum - parviverruculosum - repens - rubrum - spiculosum - umbrosum - xerophilicum

Eutypa
lata

Exobasidiellum
culmigenum

Exobasidium
vaccinii - vexans

Exophiala
dermatitidis - jeanselmei - mansonii - moniliae - pisciphila - salmonis

Exosporium
stilbaceum

Exserohilum
curvatum - fusiforme - gedarefense - heteropogonicola - inaequale - macginnisii - oryzicola - protrudens